Chapter 20

Amrhein, V, S Greenland, and B McShane. 2019. “Scientists Rise up Against Statistical Significance.” Nature 567 (7748): 305.

Beall, Cynthia M. 2006. “Andean, Tibetan, and Ethiopian patterns of adaptation to high-altitude hypoxia.” Integrative and Comparative Biology 46 (1): 18–24. https://doi.org/10.1093/icb/icj004.

Bergstrom, Carl T, and Jevin D West. 2020. Calling Bullshit: The Art of Skepticism in a Data-Driven World. Random House. https://www.callingbullshit.org/.

Brandvain, Yaniv, and Graham Coop. 2015. “Sperm Should Evolve to Make Female Meiosis Fair.” Evolution 69 (4): 1004–14. https://doi.org/https://doi.org/10.1111/evo.12621.

Broman, Karl W., and Kara H. Woo. 2018. “Data Organization in Spreadsheets.” The American Statistician 72 (1): 2–10. https://doi.org/10.1080/00031305.2017.1375989.

Chang, Winston. 2020. “R Graphics Cookbook: Practical Recipes for Visualizing Data.” https://r-graphics.org/.

Cochran, James J. 2019. “What Is the Bootstrap?” Significance 16 (1): 8–9. https://doi.org/https://doi.org/10.1111/j.1740-9713.2019.01225.x.

Cratsley, Christopher K, and Sara M Lewis. 2003. “Female Preference for Male Courtship Flashes in Photinus Ignitus Fireflies.” Behavioral Ecology 14 (1): 135–40.

D’Hont, Angélique, France Denoeud, Jean-Marc Aury, Franc-Christophe Baurens, Françoise Carreel, Olivier Garsmeur, Benjamin Noel, et al. 2012. “The Banana (Musa Acuminata) Genome and the Evolution of Monocotyledonous Plants.” Nature 488 (7410): 213–17. https://doi.org/10.1038/nature11241.

Fieberg, John R, Kelsey Vitense, and Douglas H Johnson. 2020. “Resampling-Based Methods for Biologists.” PeerJ 8: e9089.

Gelman, Andrew, and John Carlin. 2017. “Some Natural Solutions to the p-Value Communication Problem—and Why They Won’t Work.” Journal of the American Statistical Association 112 (519): 899–901. https://doi.org/10.1080/01621459.2017.1311263.

Grolemund, Garrett, and Hadley Wickham. 2018. “R for Data Science.” https://r4ds.had.co.nz/.

Healy, Kieran. 2018. Data Visualization: A Practical Introduction. Princeton University Press. https://socviz.co/.

Humphrey, Parris T, and Joanna Masel. 2016. “Outcome Orientation: A Misconception of Probability That Harms Medical Research and Practice.” Perspectives in Biology and Medicine 59 (2): 147–55.

Ismay, Chester, and Albert Y Kim. 2019. Statistical Inference via Data Science: A ModernDive into r and the Tidyverse. CRC Press. https://moderndive.com/.

Pickup, Melinda, Yaniv Brandvain, Christelle Fraïsse, Sarah Yakimowski, Nicholas H. Barton, Tanmay Dixit, Christian Lexer, Eva Cereghetti, and David L. Field. 2019. “Mating System Variation in Hybrid Zones: Facilitation, Barriers and Asymmetries to Gene Flow.” New Phytologist 224 (3): 1035–47. https://doi.org/https://doi.org/10.1111/nph.16180.

Sandve, Anton AND Taylor, Geir Kjetil AND Nekrutenko. 2013. “Ten Simple Rules for Reproducible Computational Research.” PLOS Computational Biology 9 (10): 1–4. https://doi.org/10.1371/journal.pcbi.1003285.

Simmons, Leigh W., and Benjamin Roberts. 2005. “Bacterial Immunity Traded for Sperm Viability in Male Crickets.” Science 309 (5743): 2031–31. https://doi.org/10.1126/science.1114500.

Swierk, Lindsey, and Tracy Langkilde. 2019. “Fitness costs of mating with preferred females in a scramble mating system.” Behavioral Ecology 30 (3): 658–65. https://doi.org/10.1093/beheco/arz001.

Tufte, Edward R. 1983. The Visual Display of Quantitative Information. pub-gp:adr: pub-gp.

Turner, DC. 1975. The Vampire Bat. Baltimore, MD.: The Johns Hopkins University Press.

Wainer, Howard. 2007. “The Most Dangerous Equation.” American Scientist 95 (3): 249.

Wasserstein, Ronald L., and Nicole A. Lazar. 2016. “The ASA Statement on p-Values: Context, Process, and Purpose.” The American Statistician 70 (2): 129–33. https://doi.org/10.1080/00031305.2016.1154108.

Weissgerber, Natasa M. AND Winham, Tracey L. AND Milic. 2015. “Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm.” PLOS Biology 13 (4): 1–10. https://doi.org/10.1371/journal.pbio.1002128.

Whitlock, Michael C, and Dolph Schluter. 2020. The Analysis of Biological Data. Third Edition.

Wickham, Hadley. 2014. “Tidy Data.” Journal of Statistical Software, Articles 59 (10): 1–23. https://doi.org/10.18637/jss.v059.i10.

———. 2016. Ggplot2: Elegant Graphics for Data Analysis. Springer-Verlag New York. https://ggplot2.tidyverse.org.

Wilke, Claus O. 2019. Fundamentals of Data Visualization: A Primer on Making Informative and Compelling Figures. O’Reilly Media. https://clauswilke.com/dataviz/.

Xie, Yihui, Joseph J Allaire, and Garrett Grolemund. 2018. R Markdown: The Definitive Guide. CRC Press.