7 Appendix
Appendix 1
| Name | Language | Description | Link |
|---|---|---|---|
| dataone | R | Search across repositories, and read and write data and metadata from the | https://cran.rstudio.com/web/packages/dataone/ |
| EML | R | https://github.com/ropensci/EML | |
| rfigshare | R | Push data, figures, and text to, and search and retrieve data from, | https://github.com/ropensci/rfigshare |
| AntWeb | R | Access data from the world's largest ant database. Maintained and developed by the California Academy of Science | https://cran.rstudio.com/web/packages/AntWeb/ |
| brranching | R | Fetch Phylogenies | https://github.com/ropensci/brranching/ |
| ecoretriever | R | R client wrapping the Python | https://ropensci.org/tutorials/ecoretriever_tutorial.html |
| geonames | R | Grab data from the GeoNames geographical database which covers all countries and contains over eight million placenames | https://github.com/ropensci/geonames |
| pangaear | R | An R client to interact with the | https://github.com/ropensci/pangaear |
| helmintR | R | Access parasite occurrences from the | https://github.com/ropensci/helminthR |
| mapr | R | Visualize species ocurrences with r | https://cran.rstudio.com/web/packages/mapr/ |
Showing 1 to 10 of 44 entries
Additional R resources on text mining can be found in the CRAN Natural Processing Task View.
Apppendix 2
| Database | Link | Free / Subscription | Programatic search | Programatic download | Span | main lenguage |
|---|---|---|---|---|---|---|
| Redalyc | www.redalyc.org/ | Free | NO | NO | Latin America, Caribbean, Spain & Portugal | Spanish, Portuguese |
| FreeFullPDF | www.freefullpdf.com/ | Free | NO | NO | Worldwide | English |
| Wiley | www.wiley.com/ | Subscription | NO | NO | Worldwide | English |
| CORE | core.ac.uk/ | Free | YES | NO | Worldwide | English |
| Microsoft Academic | academic.microsoft.com/ | Free (10K queries per month) | YES | NO | Worldwide | English |
| Springer | www.springer.com/ | Subscription | YES | only metadata, full text available only for open source documents | Worldwide | English |
| Web of Science | webofknowledge.com | Subscription | YES | metadata & abstracts | Worldwide | English |
| arXiv | arxiv.org/ | Free | YES | YES | Worldwide | English |
| Russian Science Citation index | elibrary.ru/ | Free | NO | NO | Russia + other locations around the globe. Worldwide coverage of russian authors or russian citations | Russian |
| SciELO | www.scielo.org/ | Free | NO | NO | Latin America, Caribbean,Southafrica, Spain & Portugal | Spanish, Portuguese |
Showing 1 to 10 of 21 entries
Appendix 3
| terms | |
|---|---|
| 1 | animaldispers |
| 2 | antplant |
| 3 | bipartit |
| 4 | carri |
| 5 | coevolut |
| 6 | coevolutionari |
| 7 | coexist |
| 8 | conspecif |
| 9 | consum |
| 10 | cooccur |
Showing 1 to 10 of 46 entries
Common terms used to describe frugivory biotic interactions in published literature, terms have been selected from a pool of articles refering to frugivory (see Suplement)