14 dynamic programming

–DPGapOpen Penalty for gap opening in short indel detection. -1 by default.

–DPGapExt Penalty for gap extension in short indel detection. 0 by default.

–DPMismatch Penalty for mismatches in short indel detection. 0 by default.

–DPMatch Score for matched bases in short indel detection. 2 by default.