Datasets

Below is a list of projects with complete analyses:

BRAINSCOPE

Data access: https://github.com/njhunsak/BRAINSCOPE

• T1 Quality Control (FS Euler)
• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
  • recon-all longitudinal
  • amygdala longitudinal
  • hippocampus longitudinal
• DWI Quality Control
• AFQ
• TBSS with ENIGMA template

CENC

Data access: https://github.com/njhunsak/CENC

• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
  • recon-all longitudinal
  • amygdala longitudinal
  • hippocampus longitudinal
• Resting State

HDFT

Data access: https://github.com/njhunsak/HDFT

• FreeSurfer v6.0.0
  • recon-all
  • brainstem

KPCA

Data access: https://github.com/njhunsak/KPCA

• T1 Quality Control (FS Euler)
• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
• DWI Quality Control
• AFQ
• TBSS with ENIGMA template

MAX-IOWA

Data access: https://github.com/njhunsak/MAX-IOWA

• T1 Quality Control (FS Euler)
• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
• AFQ
• TBSS with ENIGMA template
• Resting State

MAX-MEG

Data access: https://github.com/njhunsak/MAX-MEG

• T1 Quality Control (FS Euler)
• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
• Resting State

MAX-UCSD

Data access: https://github.com/njhunsak/MAX-UCSD

• T1 Quality Control (FS Euler)
• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
• AFQ
• TBSS with ENIGMA template
• Resting State

MIOS

Data access: https://github.com/njhunsak/MIOS

• T1 Quality Control (FS Euler)
• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
• AFQ
• TBSS with ENIGMA template

OSA

Data access: https://github.com/njhunsak/OSA

• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus
  • thalamus
  • brainstem
• TBSS with ENIGMA template
• Resting State

SOBIK

Data access: https://github.com/njhunsak/OSA

• FreeSurfer v6.0.0
  • recon-all
  • amygdala
  • hippocampus